BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037E06SP1|AL430399
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1257 1742 0.0
>3x_Contig1257
Length = 4889
Score = 1742 bits (879), Expect = 0.0
Identities = 879/879 (100%)
Strand = Plus / Plus
Query: 1 aggttgctcaaagactttgaaattgaatgcgctctgccagtaactagtgacgacgacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 aggttgctcaaagactttgaaattgaatgcgctctgccagtaactagtgacgacgacaga 1260
Query: 61 caggtcaatttggcgggccaaatgatcgcattagaaggtaaagtgtctcagttttctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 caggtcaatttggcgggccaaatgatcgcattagaaggtaaagtgtctcagttttctttg 1320
Query: 121 tctgtgataagatttgccaaagttatggggaatattttagattcaacgttcaagagaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tctgtgataagatttgccaaagttatggggaatattttagattcaacgttcaagagaggc 1380
Query: 181 atgactacatcactgactaaacaagcagctttggtgcatgagaacgcccttgataattgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 atgactacatcactgactaaacaagcagctttggtgcatgagaacgcccttgataattgg 1440
Query: 241 agacatggtttacagaaagatctctttttccaattagatgttaatggcacgattaatatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 agacatggtttacagaaagatctctttttccaattagatgttaatggcacgattaatatg 1500
Query: 301 gacgaattcaatcaacaaaagcaatactctaaatcactttcaccacgcactgccgctttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gacgaattcaatcaacaaaagcaatactctaaatcactttcaccacgcactgccgctttt 1560
Query: 361 actcacaattccttggtgttaatgacgttgtattttatggctaaatgtatgattcaccta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 actcacaattccttggtgttaatgacgttgtattttatggctaaatgtatgattcaccta 1620
Query: 421 ccggtcgtggctaccaagccacttgttgctgaggcaattcaaaccccaaccgataatcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ccggtcgtggctaccaagccacttgttgctgaggcaattcaaaccccaaccgataatcaa 1680
Query: 481 actgaaaacggatcggttgacagatctctgtcatcatatgtcctattacagcaagcgacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 actgaaaacggatcggttgacagatctctgtcatcatatgtcctattacagcaagcgacc 1740
Query: 541 aatacgctcctaaacgttttgacagcgttgaactctatatatctgccgttacctataaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 aatacgctcctaaacgttttgacagcgttgaactctatatatctgccgttacctataaat 1800
Query: 601 ttggcaagaaccaagactcgttttggtttattcagcgcacgtggctcgttggaatatacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 ttggcaagaaccaagactcgttttggtttattcagcgcacgtggctcgttggaatatacc 1860
Query: 661 aaaggtggtgcattattccaagacaacaaagccttattactagacttagtaaaagaactg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 aaaggtggtgcattattccaagacaacaaagccttattactagacttagtaaaagaactg 1920
Query: 721 gagactgataagaaattagaactaccaggcaatacaagctggcatagcttgaaactattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gagactgataagaaattagaactaccaggcaatacaagctggcatagcttgaaactattt 1980
Query: 781 gatctctcgattaacttgatcttgcaacctgtcaattcaaatccagagaagacagaaaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 gatctctcgattaacttgatcttgcaacctgtcaattcaaatccagagaagacagaaaag 2040
Query: 841 atgatacaaaagaaaattaactactacaacaagctaatg 879
|||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 atgatacaaaagaaaattaactactacaacaagctaatg 2079
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6471
Number of Sequences: 1807
Number of extensions: 6471
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)